NEURON HOC documentation

(Switch to Python documentation)

Quick Links

• Index, Download in zip format

• Old documentation: Quick Index (contributed by Mike Neubig), Index, Contents, Download in zip format

• Commonly used:

  Deck, File, Glyph, Graph, GUIMath, List, Matrix, Pointer, PtrVector, PWManager, Random, StringFunctions, SymChooser, TextEditor, Timer, ValueFieldEditor, VBox, Vector

  BBSaveState, CVode, FInitializeHandler, Impedance, KSChan, LinearMechanism, MechanismStandard, MechanismType, NetCon, ParallelContext, ParallelNetManager, PlotShape, Python Language, RangeVarPlot, SaveState, SectionBrowser, SectionList, SectionRef, Shape, StateTransitionEvent

  Widgets, FunctionFitter, Conceptual Overview of Sections, Printf (Formatted Output), HOC Keywords, Common Math Functions (HOC), NEURON Extension to NMODL, NMODL, Point Processes and Artificial Cells, Predeclared Variables, Standard Run Tools, HOC Syntax, Topology

  Basic Reaction-Diffusion

Basic Programming

• Python Language
• HOC Language
• Mathematics
• Strings
• GUI Design
• Pointers
• Timer
• System Calls
• Error Handling
• Dynamic Code Loading and Execution
• Project Management
• Debugging and Internals Access

Model Specification

• Model Specification GUI Tools
• Programmatic Model Specification

Simulation Control

• Programmatic Simulation Control
• Standard Run Tools
• Rarely Used Compilation Options
• Interpreter Management

Visualization

• Glyph
• Graph
• Grapher
• PlotShape
• PlotShape Window
• RangeVarPlot
• Shape
• Notification
• GUI Look And Feel
• MenuExplore
• Obsolete Plotting

Analysis

• Programmatic Analysis Tools
• GUI Analysis Tools